I've often had quite pronounced allergic reactions to certain apples, but especially if the peel is left on, despite pesticide content - in fact, I have an apple tree in my garden, and despite keeping it clean and well-cared for without the use of any pesticides, and despite taking care to clean everything adequately, I've had reactions to them too.
I found this brief clip of Peat saying that some of the more popular species of apple develop an insecticidal enzyme which can be highly allergenic, but that this might be reduced with cooking, so perhaps I'm unlucky in that I have one of those species. Does it stand to reason that the procyanidin B-2 content would vary significantly between species, and if so - perhaps if one wanted as high a procyanidin B-2 content as possible, it might be fruitful to attempt to discover which species are commonly used for extraction by the supplement manufacturers? I wasn't able to find many papers which explored this, although this one about phenol content of a few apple species might be a useful starting point.
Interviewer: "[...] what types of fruit do you recommend, and which ones do you think could hurt us instead of help us? [...]"
~
Ray Peat: "[...] besides the starch problem with some fruits such as bananas, you have the allergy problem: and I think that's partly because of the industrialisation of banana-farming, use of a lot of chemicals, and just overuse of the soil stresses the plants - and you've heard of the latex allergy, probably, corresponding to the banana allergy? Both of those, the rubber tree and the banana plant are highly-industrialised, stressed crops, and I think that it's the defensive stress substances that the plants evolved to kill insects which were attacking them. Those highly-cropped species produce this insecticidal enzyme which happens to be highly allergenic to humans. Even some brands of apples have quite a high allergen content, and cooking many of the allergenic fruits makes them safer to eat. [...]"
I think perhaps this isn't news to a lot of people viewing this thread, but I've included it just in case it helps someone make a connection later.